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Travis Wheeler
Member of the Graduate Faculty | Associate Professor
Pharmacy Practice and Science
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Overview
Research
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Collaboration
(1)
Syed Zaidi
Mutual work: 1 Supervisor
Collaboration Details
Grants
(12)
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Publications
(17)
Recent
nail: software for high-speed, high-sensitivity protein sequence annotation
2024
bioinformatics,
protein sequencing,
computational biology,
software development,
data analysis
NEAR: Neural Embeddings for Amino acid Relationships
2024
neural networks,
bioinformatics,
amino acids,
protein modeling,
machine learning
Sensitive and error-tolerant annotation of protein-coding DNA with BATH
2024
genomics,
bioinformatics,
molecular biology,
computational biology,
annotation
WAS IT A MATch I SAW? Approximate palindromes lead to overstated false match rates in benchmarks using reversed sequences
2023
bioinformatics,
genomics,
sequence analysis,
pattern matching,
data benchmarking
VIBES: A Workflow for Annotating and Visualizing Viral Sequences Integrated into Bacterial Genomes
2023
bioinformatics,
genomics,
viral ecology,
data visualization,
microbiology
Framework of the Alu Subfamily Evolution in the platyrrhine Three-Family Clade of Cebidae, Callithrichidae, and Aotidae
2023
genomic evolution,
primate genetics,
alu elements,
evolutionary biology,
phylogenetics
GraffiTE: a Unified Framework to Analyze Transposable Element Insertion Polymorphisms using Genome-graphs
2023
transposable elements,
genome-graphs,
polymorphisms,
genomic analysis,
bioinformatics
An FPGA-based hardware accelerator supporting sensitive sequence homology filtering with profile hidden Markov models
2023
fpga-based hardware,
accelerator,
sequence homology,
profile hidden markov models,
filtering
DISCO: A deelearning ensemble for uncertainty-aware segmentation of acoustic signals
2023
deep learning,
acoustic signals,
segmentation,
uncertainty-aware,
ensemble learning
A community effort in SARS-CoV-2 drug discovery
2023
drug discovery,
sars-cov-2,
community effort,
viral research,
collaborative research
