KMap
I am an interdisciplinary scientist working at the intersection of functional microbiology and atmospheric chemistry.I have been an Assistant Professor in the School of Natural Resources and the Environment (SNRE) since January 2017. I currently have faculty affiliations with the BIO5 Institute, the department of Hydrology and Atmospheric Sciences, the Genetics Graduate Interdisciplinary Program (GIDP), and the Global Change GIDP. I was the Director of the Biosphere 2 Tropical Rain Forest from 2018-2021.

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Research Opportunities
Courses
  • EESF
    Ecosystem Ecology and a Sustainable Future

  • BAI
    Biosphere-Atmosphere Interactions

Grants
  • Funding agency logo
    A Volatile Environment: How Volatile Mediated Plant and Microbial Interactions Extend the Rhizosphere and Enhance Soil Carbon Storage

    Principal Investigator (PI)

    2022

    $880.2K
    Active
  • Funding agency logo
    Trees as Conduits for Connecting Belowground Microbial Processes to Aboveground CH4 Emissions at the Terrestrial-Aquatic Interface

    Co-Investigator (COI)

    2021

    $856.1K
    Active
  • Funding agency logo
    SitS: Decoding Microbial Interactions in Soil Systems using Subsurface Sensors for Volatile Organic Compounds

    Principal Investigator (PI)

    2021

    $547.2K
    Active
  • Funding agency logo
    CAREER: Unearthing the Role of Belowground Biology in Biosphere-Atmosphere Volatile Organic Compound (VOC) Exchange

    Principal Investigator (PI)

    2021

    $357.0K
    Active
  • Funding agency logo
    SitS: Decoding Microbial Interactions in Soil Systems using Subsurface Sensors for Volatile Organic Compounds

    Principal Investigator (PI)

    2021

    $31.2K
    Active
  • Funding agency logo
    NRT-URoL: BRIDGES - Building Resources for InterDisciplinary training in Genomic and Ecosystem Sciences

    Key Personnel (KP)

    2020

    $3.0M
    Active
  • Funding agency logo
    Advancing Carbonyl Sulfide (OCS) As an Independent Atmospheric Ttracer for Global Photosynthesis Through Quantification of Microbial-Mediated Sources and Sinks in Soils

    Principal Investigator (PI)

    2020

    $760.5K
    Active
  • Funding agency logo
    Spatially-Resolved Microbial Activity Probe Using Infrared Measurements of Nitrous Oxide and Methane Isotopes in Soil

    Principal Investigator (PI)

    2019

    $554.1K
    Active
  • Funding agency logo
    Spatially-Resolved Microbial Activity Probe Using Infrared Measurements of Nitrous Oxide and Methane Isotopes in Soil

    Principal Investigator (PI)

    2018

    $74.9K
Technologies / Patents
      News
      • Diverse Plant Water-Use Strategies Make Forests More Resilient to Extreme Drought

        2021

      • $3M Grant Helps Students Bridge Sciences to Solve the World's Biggest Problems

        2020

      • Biosphere 2 Rain Forest Closed During Drought Experiment

        2019

      • 'Rainforest Under Glass' Kissed by Rain After Two-Month Drought

        2019

      Publications (107)
      Recent
      • Plant water use strategies drive the fate of newly fixed carbon in an experimental rainforest under drought

        2023

      • Understanding drought dynamics of carbon and water fluxes from leaf to ecosystem scales in an experimental tropical forest

        2023

      • Leaf-level metabolic changes in response to drought affect daytime CO2emission and isoprenoid synthesis pathways

        2022

      • Microbial volatile organic compounds: important but overlooked in microbial systems studies

        2022

      • In situ monitoring of tree water uptake depths, storage and transport reveals different strategies during drought and recovery

        2022

      • Sensitivity of soil hydrogen uptake to natural and managed moisture dynamics in a semiarid urban ecosystem

        2022

      • Capturing the microbial volatilome: an oft overlooked 'ome'

        2022

      • Ecosystem BVOC fluxes during drought and recovery trace ecohydrological responses of the vegetation and soil microbial interactions - insights from an ecosystem-scale isotope labelling experiment

        2022

      • Elucidating Drought-Tolerance Mechanisms in Plant Roots through 1H NMR Metabolomics in Parallel with MALDI-MS, and NanoSIMS Imaging Techniques

        2022

      • Deriving xylem water isotopic compositions from in situ transpiration measurements: opportunity for plant source water identification? 

        2022

      • Ecosystem fluxes during drought and recovery in an experimental forest

        2021

      • Spatial metabolic profiling in roots reveals plant specific responses to drought at the Biosphere 2 tropical rainforest

        2021

      • Using a Novel Sensor for Detection of Subsurface Volatile Organic Compounds

        2021

      • Microbial Sources and Sinks of Volatile Organic Compounds (VOCs) I eLightning

        2021

      • Plant functional groups and soil interactions drive ecosystem fluxes during drought and recovery-insights from an ecosystem-scale isotope labelling experiment

        2021

      • Capturing the microbial volatilome: an oft overlooked'ome'

        2021

      • Microbial Volatile Organic Compounds: Important but Undetected

        2021

      • Soil gas probes for monitoring trace gas messengers of microbial activity

        2021

      • Understanding the Effect of Aboveground Vegetation Composition on Carbonyl Sulfide and Carbon Dioxide Fluxes in Alaskan Tundra and Boreal Biomes.

        2021

      • Diverse functional responses drive ecosystem drought impact and recovery-insights from an ecosystem-scale drought experiment

        2021

      • Effect of drought on soil microbial metabolisms driving carbon allocation and volatile organic compound cycling in the tropical rainforest at Biosphere 2

        2021

      • Effects of drought conditions on VOC soil fluxes within the rainforest mesocosm of Biosphere 2

        2021

      • Connecting above-ground greenhouse gas fluxes with subsurface nutrient cycling at an intensively-managed cattle grazing pasture

        2021

      • Microbial controls of nitrous oxide pulses in rewetted forest soils: An integrated-omic and isotopic approach

        2021

      • Microbial sources and sinks of volatile organic compounds (VOCs)

        2021

      • Microbial Community and Metabolomic Response to Drought and Ecological Stress at the Biosphere 2 Tropical Rainforest

        2021

      • Evaluation of carbonyl sulfide biosphere exchange in the Simple Biosphere Model (SiB4)

        2021

      • Chiral monoterpenes reveal forest emission mechanisms and drought responses

        2021

      • Factor Analysis of VOC Concentrations Over a Vertical Gradient Within Biosphere 2 Rainforest Elucidates Strong Microbial Sources Near Ground Level

        2021

      • Real-Time in-situ Measurements of Subsurface Volatile Organic Compounds as Tracers for Crop Signaling

        2021

      • The Volatilome: A Vital Piece of the Complete Soil Metabolome

        2021

      • Subsurface measurements of nitrogen dynamics in agricultural soil

        2021

      • Tropical rainforests under severe drought stress: distinct water use strategies among and within species

        2021

      • Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System.

        2021

      • Green infrastructure influences soil health: Biological divergence one year after installation

        2021

      • Predicting volatile organic compound (VOC) production and uptake locations using depth-resolved concentrations for a better understanding of the soil metabolome

        2021

      • Soil-microbe-plant feedbacks to ecosystem drought in a model tropical rainforest ecosystem

        2021

      • Tracing ecosystem scale interactions of volatile organic compound (VOC) and CO2 emissions by position-specific and whole ecosystem isotope labelling

        2020

      • Formation and Fluxes of Soil Trace Gases

        2020

      • Plant Water Relation and Drought: Relationship Between Plant Water Potential and Relative Leaf Water Content in Different Tropical Plants

        2020

      • Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection

        2020

      • Hydrogen-Oxidizing Bacteria Are Abundant in Desert Soils and Strongly Stimulated by Hydration

        2020

      • Controlled lacustrine microcosms show a brGDGT response to environmental perturbations

        2020

      • Belowground changes to community structure alter methane-cycling dynamics in Amazonia

        2020

      • Changes in chiral monoterpenes during drought in a rainforest reveal distinct source mechanisms

        2020

      • Exploring the role of volatile organic compounds in the rhizosphere interactome

        2020

      • Understanding drought induced responses in leaf and root CO2 and VOC fluxes through position specific isotope labelling

        2020

      • Carbonyl sulfide reflections of leaf and ecosystem processes in a tropical rainforest under controlled drought

        2020

      • A genomic catalog of Earth's microbiomes

        2020

      • Volatile organic compound fluxes across the soils of a rainforest ecosystem during a simulated drought experiment

        2020

      • Above ground response of rainforest functional groups to experimental drought

        2020

      • Soil Biogeochemical Response to Drought Conditions in the Biosphere 2 Rainforest

        2020

      • Exploring The Birch Effect In The Subsurface Using Diffusive Soil Probes

        2020

      • How does drought affect the $\delta$18O cellulose record? A Biosphere 2 experiment.

        2020

      • How does drought affect the δ18O cellulose record? A Biosphere 2 experiment.

        2020

      • Rhizosphere Volatile Organic Compounds: A real-time approach using diffusive soil probes on a controlled Tropical Rainforest

        2020

      • Biogenic VOC emissions under drought and temperature stress

        2020

      • Revealing how nitrogen fertilisation regulates the fluxes of COS and CO2 between soil communities and the atmosphere using a functional metagenomic and metatranscriptomic approach

        2020

      • Tracing dynamic water uptake and transport from root to canopy by online monitoring of water isotopes in an enclosed tropical forest in response to drought

        2020

      • Drought effects on the carbon balance and VOC emissions of a tropical rainforest ecosystem

        2020

      • Supplementary material to "Versatile soil gas concentration and isotope monitoring: optimization and integration of novel soil gas probes with online trace gas detection"

        2020

      • Rainforest-to-pasture conversion stimulates soil methanogenesis across the Brazilian Amazon

        2020

      • Scaling the fluxes of carbonyl sulphide (COS) between soils and the atmosphere from the microcosm to the globe.

        2019

      • Exploring Isotopically-Resolved Subsurface and Root Volatile Organic Compound Signatures at Biosphere 2

        2019

      • Water cycling (pools and movement) through an enclosed tropical forest in response to drought.

        2019

      • Diversity of Leaf Secondary Compounds (Lipid and Volatiles) of Six Tropical Plant Species

        2019

      • Reconciling negative soil CO2 fluxes: insights from a large-scale experimental hillslope.

        2019

      • Green infrastructure influences on microbial community composition in arid urban environments

        2019

      • Tracing recent carbon from photosynthesis to stem and soil respiration in an experimental tropical rainforest in response to drought

        2019

      • Noninvasive methods for dynamic mapping of microbial populations across the landscape.

        2019

      • Position specific 13 C pyruvate labeling demonstrates how drought responses affect hydrogen isotope fractionation during plant lipid biosynthesis

        2019

      • New estimates of global land photosynthesis using updated theories of CO2-H2O oxygen isotope exchange rates in land water pools.

        2019

      • Opportunities and Challenges for Revealing Ecosystem Interactions through Whole-Ecosystem Stable Isotope Labeling and Experimentation: Lessons Learned from the Biosphere 2 Water, Atmosphere, and Life Dynamics Campaign

        2019

      • Net exchange of carbonyl sulfide, carbon monoxide, and carbon dioxide in a highly oligotrophic basaltic soil: a mesocosm study.

        2019

      • Carbonyl sulfide (COS) as a tracer for plant carbon and water cycling: how do recent models from COS science perform in a controlled ecosystem?

        2019

      • Plant carbon allocation in tropical forests under drought stress-Shifting the balance between primary and secondary metabolism such as CO 2 and VOC emissions

        2019

      • A Journey from Roots to Bulk Soil: Organic Matter Characterization in the Biosphere 2 Tropical Rainforest

        2019

      • Integrating Soil Genomics into the Study of Biosphere-Atmosphere Trace Gas Fluxes

        2019

      • Coupling new soil probes and high-resolution trace gas isotopomer measurement systems: evaluating feasibility in controlled soil columns

        2019

      • An Examination of the Count, Viability, and Characterization of Microbes within the Rainwater Supply of the Landscape Evolution Observatory to Identify Impacts on the Soil Microbiome.

        2019

      • Exploring Fast Nitrogen, Carbon, and VOC Dynamics During Simulated Drought and Rewetting Events

        2019

      • From Soils to the Atmosphere: Characterizing Abiotic and Biotic Interactions That Dictate the Microbial Impact on Soil and Atmospheric Chemistry.

        2019

      • Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes.

        2019

      • Structural and Functional Response of Microbial Community in an Oligotrophic Basalt Soil System to Shifts in Rainfall Regimes.

        2019

      • Microbial Community Drives BrGDGT Response to Environmental Changes in Freshwater Microcosms

        2019

      • Biosphere 2: The Changes of Soil Composition and Properties in Time in the Rainforest Biome

        2019

      • Assessing changes in landscape-level microbial communities with noninvasive methods for dynamic mapping

        2019

      • Reconciling Negative Soil CO2 Fluxes: Insights from a Large-Scale Experimental Hillslope

        2019

      • Comparison of Soil Organic Matter (SOM) Composition in the soil column at the Biosphere 2 Tropical Rainforest

        2019

      • Tracking Dynamics of Soil Nitrogen Cycling with High Temporal Resolution

        2019

      • Toward Spatially Resolved Mapping of Subsurface Biological Processes Using Isotopic Signatures.

        2019

      • Differences in N2O fluxes and denitrification gene abundance in the wet and dry seasons through soil and plant residue characteristics of tropical tree crops

        2019

      • Water Harvesting Techniques Result in Varied Decomposition Rates in Soil

        2019

      • Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes

        2018

      • Coupled Biological and Abiotic Mechanisms Driving Carbonyl Sulfide Production in Soils

        2018

      • Hydrogenation of organic matter as a terminal electron sink sustains high CO2:CH4 production ratios during anaerobic decomposition

        2017

      • Ecosystem fluxes of hydrogen in a mid-latitude forest driven by soil microorganisms and plants

        2017

      • Reviews and Syntheses: Carbonyl Sulfide as a Multi-scale Tracer for Carbon and Water Cycles

        2017

      • Soil carbon content and relative abundance of high affinity H2-oxidizing bacteria predict atmospheric H2 soil uptake activity better than soil microbial community composition

        2015

      • Seasonal fluxes of carbonyl sulfide in a midlatitude forest

        2015

      • Ecosystem fluxes of hydrogen: a comparison of flux-gradient methods

        2014

      • Supplementary material to "The variability of methane, nitrous oxide and sulfur hexafluoride in Northeast India"

        2013

      • The variability of methane, nitrous oxide and sulfur hexafluoride in Northeast India

        2013

      • Consumption of atmospheric hydrogen during the life cycle of soil-dwelling actinobacteria

        2013

      • Field Measurement of the Fate of Atmospheric H2 in a Forest Environment: from Canopy to Soil

        2012

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