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https://riedel-kruse.arizona.edu/

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Courses
  • BT
    Biotechnology Techniques

  • GMN
    Genetic and Molecular Networks

Grants
  • Funding agency logo
    Collaborative Research: Foundations of Programmable Living Materials Through Synthetic Biofilm Engineering and Quantitative Computational Modeling

    Principal Investigator (PI)

    2023

    $307.3K
    Active
  • Funding agency logo
    FMRG: Bio: Distributed Methane Conversion into Value Chemicals via Synthetic Microbial Consortia

    Principal Investigator (PI)

    2022

    $3.2M
    Active
  • Funding agency logo
    From Synthetic Bacterial Adhesions to Synthetic Bacterial Materials

    Principal Investigator (PI)

    2022

    $311.0K
    Active
  • Funding agency logo
    Biofilm Lithography: A New Paradigm to Optically Control and Study Biofilm Growth Dynamics

    Principal Investigator (PI)

    2020

    $71.3K
Publications (106)
Recent
  • Synthetic adhesion logic, self-assembly of bacterial swarms, and multicellular tiling patterns

    2023

  • Characterizing and tuning the bacterial synthetic adhesion biophysics for biomaterial applications

    2023

  • Cell-cell adhesion control in multicellular assemblies under the influence of external fluid flow

    2023

  • DIY liquid handling robots for integrated STEM education and life science research

    2022

  • 4-bit adhesion logic enables universal multicellular interface patterning

    2022

  • Synthetic 4-bit adhesion logic and universal multicellular interface patterning

    2021

  • Nonlinear delay differential equations and their application to modeling biological networks

    2021

  • Scientific inquiry in middle schools by combining computational thinking, wet lab experiments, and liquid handling robots

    2021

  • Microbe-HCI: Introduction and Directions for Growth

    2021

  • Micro-HBI: Human-Biology Interaction with Living Cells, Viruses, and Molecules

    2021

  • Engineering and modeling of multicellular morphologies and patterns

    2020

  • Pac-Euglena: A Living Cellular Pac-Man Meets Virtual Ghosts

    2020

  • Synthetic Cell-cell Adhesion Mediates Aggregation and Boundary Formation in Swarming E. coli

    2020

  • Dynamics and Optimal Behavioral Strategies of Motile Networks

    2020

  • Nonlinear delay differential equations and their application to modeling biological network motifs

    2020

  • Interactive programming paradigm for real-time experimentation with remote living matter

    2019

  • First-hand, immersive full-body experiences with living cells through interactive museum exhibits

    2019

  • Scientific discovery games for biomedical research

    2019

  • Author Correction: First-hand, immersive full-body experiences with living cells through interactive museum exhibits (Nature Biotechnology, (2019), 37, 10, (1238-1241), 10.1038/s41587-019-0272-2)

    2019

  • Learning on a chip: Microfluidics for formal and informal science education

    2019

  • First-hand, immersive full-body experiences with living cells through interactive museum exhibits (vol 37, pg 1238, 2019)

    2019

  • Molecular motors in materials science

    2019

  • Polygonal motion and adaptable phototaxis via flagellar beat switching in Euglena gracilis

    2018

  • High-resolution Patterned Biofilm Deposition Using pDawn-Ag43

    2018

  • Erratum to: Polygonal motion and adaptable phototaxis via flagellar beat switching in the microswimmer Euglena gracilis (Nature Physics, (2018), 14, 12, (1216-1222), 10.1038/s41567-018-0277-7)

    2018

  • Optically Patterned Biofilms via Transcriptional Control of Adhesin Expression

    2018

  • Polygonal motion and adaptable phototaxis via flagellar beat switching in the microswimmer Euglena gracilis

    2018

  • Polygonal motion and adaptable phototaxis via flagellar beat switching in the microswimmer Euglena gracilis (vol 14, pg 1216, 2018)

    2018

  • Biophysics of Collective Phototaxis of Euglena gracilis

    2018

  • Prototyping biotic games and interactive experiments with javascript

    2018

  • Polygonal swimming via coordinated flagellar beat switching in microswimmer Euglena gracilis

    2018

  • Regulation of epithelial migration by epithelial cell adhesion molecule requires its Claudin-7 interaction domain

    2018

  • Affordances of Digital, Textile and Living Media for Designing and Learning Biology in K-12 Education.

    2018

  • Design Matters: The Impact of Technology Design on Students’ Inquiry Behaviors.

    2018

  • Formal and Informal Biophysics Education enabled by Interactive Biotechnology in the Cloud

    2018

  • Versatile phototactic behaviors of the chiral microswimmer Euglena gracilis

    2018

  • Design Guidelines and Empirical Case Study for Scaling Authentic Inquiry-based Science Learning via Open Online Courses and Interactive Biology Cloud Labs

    2018

  • Biofilm Lithography enables high-resolution cell patterning via optogenetic adhesin expression

    2018

  • Design matters: The impact of technology design on students’ inquiry behaviors

    2018

  • A Synthetic Bacterial Cell-Cell Adhesion Toolbox for Programming Multicellular Morphologies and Patterns

    2018

  • A genetically encoded toolbox of orthogonal adhesins for bacterial self-assembly

    2018

  • Life-science experiments online: Technological frameworks and educational use cases

    2018

  • A Programming Toolkit for Automating Biophysics Experiments with Microorganism Swarms

    2018

  • Incorporating a commercial biology cloud lab into online education

    2018

  • Biofilm Lithography: High-resolution cell patterning via optogenetic adhesin expression

    2017

  • Compression and release dynamics of an active matter system of\textit {Euglena gracilis}

    2017

  • Authentic science inquiry learning at scale enabled by an interactive biology cloud experimentation lab

    2017

  • Biophysics of Euglena phototaxis

    2017

  • Engineering emergent multicellular behavior through synthetic adhesion

    2017

  • Stem cell motility enables a density-dependent rate of fate commitment during scaled resizing of adult organs

    2017

  • An interactive programming paradigm for realtime experimentation with remote living matter

    2017

  • Interactive Biophysics with Microswimmers: Education, Cloud Experimentation, Programmed Swarms, and Biotic Games

    2017

  • Interactive Biology Cloud Lab Enables Authentic Inquiry-Based Science Learning at MOOC Scale

    2017

  • A genetically encoded adhesin toolbox for programming multicellular morphologies and patterns

    2017

  • A Model for Adult Organ Resizing Demonstrates Stem Cell Scaling through a Tunable Commitment Rate

    2017

  • Compression and release dynamics of an active matter system of Euglena gracilis

    2017

  • Device and programming abstractions for spatiotemporal control of active micro-particle swarms

    2017

  • Liquid-handling Lego robots and experiments for STEM education and research

    2017

  • Where the rubber meets the road: the impact of the interface design on model exploration in science inquiry

    2016

  • Interactive cloud experimentation for biology: Systems architecture and educational use case

    2016

  • Interactive and scalable biology cloud experimentation for scientific inquiry and education

    2016

  • Motile stem cells exhibit tissue-level spatial order during homeostasis but not growth of the adult Drosophila midgut.

    2016

  • Correction: LudusScope: Accessible Interactive Smartphone Microscopy for Life-Science Education.

    2016

  • BioGraphr: Science Games on a Biotic Computer.

    2016

  • Interactive Biotechnology: Design Rules for Integrating Biological Matter into Digital Games.

    2016

  • Regulation of Epithelial Migration by Epithelial Cell Adhesion Molecule (EpCAM).

    2016

  • Interactive biotechnology: Building your own biotic game setup to play with living microorganisms

    2016

  • LudusScope: Accessible interactive smartphone microscopy for life-science education

    2016

  • On the general analytical solution of the kinematic cosserat equations

    2016

  • Cloud Experimentation for Biology: Systems Architecture and Utility for Online Education and Research

    2015

  • A biotic video game smart phone kit for formal and informal biophysics education

    2015

  • A biotic game design project for integrated life science and engineering education.

    2015

  • Interactive biophysics labs in the cloud

    2015

  • Measuring mechanical force during zebrafish development using an expressible tension sensor

    2015

  • Tangible interactive microbiology for informal science education

    2015

  • Interactive cloud experimentation for biology: An online education case study

    2015

  • Signaling Delays Preclude Defects in Lateral Inhibition Patterning

    2015

  • Real-time and turn-based biology online experimentation

    2015

  • Microfluidic assembly kit based on laser-cut building blocks for education and fast prototyping

    2015

  • A force balance can explain local and global cell movements during early zebrafish development

    2015

  • Patterned Biofilms for Engineering Microbial Consortia

    2015

  • A Biotic Game Design Project for Integrated Life Science and Engineering Education

    2015

  • Trap it! A playful human-biology interaction for a museum installation

    2015

  • Biotic games and cloud experimentation as novel media for biophysics education

    2014

  • Active phase and amplitude fluctuations of flagellar beating.

    2014

  • Actomyosin Generated Tension Coordinates Cell Movements during Early Zebrafish Development

    2014

  • Row with the flow

    2014

  • Row with the flow Fluid forces are sufficient to keep flagella beating in synchrony.

    2014

  • Innocent Fun or "Microslavery"?: AN ETHICAL ANALYSIS OF BIOTIC GAMES

    2014

  • Shape mode analysis exposes movement patterns in biology: flagella and flatworms as case studies

    2014

  • Integrated bioprinting and imaging for scalable, networkable desktop experimentation

    2014

  • Innocent fun or “microslavery”? An ethical analysis of biotic games

    2014

  • Design, engineering and utility of biotic games

    2011

  • High-precision tracking of sperm swimming fine structure provides strong test of resistive force theory

    2010

  • High-resolution three-dimensional extracellular recording of neuronal activity with microfabricated electrode arrays

    2009

  • Coupling vs. noise: The rise and fall of synchrony in the segmentation clock

    2008

  • Synchrony dynamics during initiation, failure, and rescue of the segmentation clock

    2007

  • How molecular motors shape the flagellar beat

    2007

  • Mechanics of the axoneme: Self-organized beating patterns and vortex arrays of spermatozoa

    2005

  • Self-organization of hydrodynamically entrained sperm cells into an array of vortices

    2005

  • A self-organized vortex array of hydrodynamically entrained sperm cells

    2005

  • IH Riedel, K. Kruse, and J. Howard, Science 309, 300 (2005).

    2005

  • High speed imaging and theoretical analysis of beating sperm

    2004

  • Ab initiocalculation of the transmission coefficients from a superlattice electronic structure

    2001

  • Synchrony Dynamics During

    1992

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