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Evolution in the plant family Brassicaceae (mustard family)
Plant telomeres
Evolution of protein complexes
Evolution of Long Intergenic Non-coding RNAsVOSviewer
Research Opportunities
- Undergrad Research Opp Paid, For Credit
Grant: Not Listed
Prerequisite Courses: MCB181, CHEM151, CHEM152 Majors: MCB, BIOL, PLS, BCHM, PHYS ...
Courses
- REEResearch in Ecology and Evolution
- APGAnimal and Plant Genetics
- IBIIntroductory Biology I
Grants
- STC: Center for Research On Programmable Plant Systems
Co-Investigator (COI)
2021
$961.8K
Active - Bench Fees for Sana Shakoor
Principal Investigator (PI)
2020
$3.5K
- RESEARCH PGR: Deciphering the Link Between RNA Directed DNA Methylation and Reproduction in Brassicaceae
Co-Investigator (COI)
2016
$2.3M
- RESEARCH-PGR: Deciphering the Link Between RNA Directed DNA Methylation and Reproduction in Brassicaceae
Co-Investigator (COI)
2016
$19.5K
- Structural, Functional, and Evolutionary Analysis of Long Non-coding RNAs in Control of Stress Response and the Epigenome in Diverse Plant Species (REU)
Principal Investigator (PI)
2016
$18.0K
- Structural, Functional, and Evolutionary Analysis of Long Non-coding RNAs in Control of Stress Response and the Epigenome in Diverse Plant Species
Principal Investigator (PI)
2015
$1.3M
- Telomerase Evolution and Function in Plants
Principal Investigator (PI)
2014
$522.0K
- Telomerase Evolution in Plants
Principal Investigator (PI)
2014
$9.9K
- Recovering the origins and cultivation history of Gold-of-Pleasure (Camelina sativa)
Principal Investigator (PI)
2013
$19.7K
- ID 22366: Identifying Alternatives functions of the Telomerase Reverse Transcriptase (TERT)
Principal Investigator (PI)
2013
$14.0K
Technologies / Patents
News
- Researchers Develop Tools to Listen, Talk to Plants with $25M from NSF
2021
- Looking for the Missing Link in RNA Molecules
2015
- Blog Series: UA Students Studying, Researching Abroad
2014
- UA Conference for Undergrad Research Celebrates 25th Year
2014
Publications (41)
Recent
- Evolutionary analysis of the LORELEI gene family in plants reveals regulatory subfunctionalization
2022
- Identification and functional annotation of long intergenic non-coding RNAs in Brassicaceae
2022
- A Conserved Long Intergenic Non-coding RNA Containing snoRNA Sequences, , Affects Arabidopsis Germination and Development
2022
- A conserved long intergenic non-coding RNA containing snoRNA sequences, lncCOBRA1, affects Arabidopsis germination and development
2022
- Evolutionary and biochemical analyses reveal conservation of the Brassicaceae telomerase ribonucleoprotein complex
2020
- Divergence-based introgression polarization
2020
- Duplication and functional divergence of a calcium sensor in the Brassicaceae
2020
- N6‐methyladenosine and RNA secondary structure affect transcript stability and protein abundance during systemic salt stress in Arabidopsis
2020
- Biased gene retention in the face of introgression obscures species relationships
2020
- Agrobacterium-mediated floral-dip transformation of the obligate outcrosser Capsella grandiflora
2019
- A Chemical Biology Approach to Model Pontocerebellar Hypoplasia Type 1B (PCH1B)
2018
- Phylogenetics of Camelina Crantz.(Brassicaceae) and insights on the origin of gold-of-pleasure (Camelina sativa)
2018
- Evidence for a Unique DNA-Dependent RNA Polymerase in Cereal Crops
2018
- N-6-Methyladenosine Inhibits Local Ribonucleolytic Cleavage to Stabilize mRNAs in Arabidopsis
2018
- N6-methyladenosine inhibits local ribonucleolytic cleavage to stabilize mRNAs in Arabidopsis
2018
- Evolinc: a tool for the identification and evolutionary comparison of long intergenic non-coding RNAs
2017
- Evolinc:A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs
2017
- Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism
2016
- Evolution of Arabidopsis protection of telomeres 1 alters nucleic acid recognition and telomerase regulation
2016
- A Genomic Analysis of Factors Driving lincRNA Diversification: Lessons from Plants
2016
- The Argonaute-binding platform of NRPE1 evolves through modulation of intrinsically disordered repeats
2016
- Evolution of the telomere-associated protein POT1a in Arabidopsis thaliana is characterized by positive selection to reinforce protein-protein interaction
2015
- Evolution of the Telomere-Associated Protein POT1a in Arabidopsis thaliana Is Characterized by Positive Selection to Reinforce Protein–Protein Interaction
2015
- Ancient origin and recent innovations of RNA Plymerase IV and V
2015
- Global Analysis of the RNA-Protein Interaction and RNA Secondary Structure Landscapes of the Arabidopsis Nucleus
2015
- Distinct Roles for SOS1 in the Convergent Evolution of Salt Tolerance in Eutrema salsugineum and Schrenkiella parvula
2014
- Distinct roles of SOS1 in the convergent evolution of salt tolerance in Eutrema salsugineum and Schrenkiella parvula
2014
- Diversification times among Brassica (Brassicaceae) crops suggest hybrid formation after 20 million years of divergence
2014
- Extending the model of Arabidopsis telomere length and composition across Brassicaceae
2014
- The reference genome of the halophytic plant Eutrema salsugineum
2013
- Evolution of the Arabidopsis telomerase RNA
2012
- A duplicate gene rooting of seed plants and the phylogenetic position of flowering plants
2010
- Polyploid genome of Camelina sativa revealed by isolation of fatty acid synthesis genes
2010
- Evolution of CST function in telomere maintenance
2010
- Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana
2010
- 9 Cytoskeletal requirements during Arabidopsis trichome development
2009
- Brassicaceae phylogeny inferred from phytochrome A and ndhF sequence data: Tribes and trichomes revisited
2008
- Brassicaceae phylogeny and trichome evolution
2006
- Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview
2006
- Pennellia brachycarpa (Brassicaceae), a new species from Jujuy, Argentina
2005
- A phylogenetic analysis of western North American Draba (Brassicaceae) based on nuclear ribosomal DNA sequences from the ITS region
2003