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Courses
- MDMicrobial Diversity
- PPMPrinciples of Plant Microbiology
- REEResearch in Ecology and Evolution
- AMAdvanced Mycology
Grants
- Collaborative Research: Seed-Fungal Interactions: Uncovering Functional Specificity and Primary Symbionts as Key Drivers of Tropical Tree Recruitment
Principal Investigator (PI)
2023
$224.0K
Active - Collaborative Research: MRA: Distributions of macrofungi: quantifying ecosystem and climate drivers of fungal reproduction
Principal Investigator (PI)
2022
$380.2K
Active - Fungal biodiversity for drug discovery
Principal Investigator (PI)
2022
$70.0K
Active - Collaborative Research: MRA: Distributions of macrofungi: quantifying ecosystem and climate drivers of fungal reproduction
Principal Investigator (PI)
2022
$10.5K
Active - Collaborative Research: GCR: Growing a New Science of Landscape Terraformation: The Convergence of Rock, Fluids, and Life to form Complex Ecosystems Across Scales
Co-Investigator (COI)
2021
$1.2M
Active - Increasing the Effectiveness of Monitoring Abundance, Migratory Patterns, and Border Impacts of a Rare Pollinator, the Lesser Long-Nosed Bat
Co-Investigator (COI)
2021
$49.5K
Active - NRT-URoL: BRIDGES - Building Resources for InterDisciplinary training in Genomic and Ecosystem Sciences
Co-Investigator (COI)
2020
$3.0M
Active - Collaborative Research: Leveraging historical collections and new surveys to characterize foundational shifts in vital symbioses in the threatened Arctic
Principal Investigator (PI)
2020
$443.9K
Active - Collaborative Research: Leveraging historical collections and new surveys to characterize foundational shifts in vital symbioses in the threatened Arctic
Principal Investigator (PI)
2020
$55.9K
Active - DS CESU: Characterizing Genetic Structure of Mexican Spotted Owls
Principal Investigator (PI)
2020
$26.4K
Active
Publications (148)
- Responses of endophytic fungi in a Puerto Rican rainforest to damage from Hurricane Maria
2022
- The pioneer effect advantage in plant invasions: site priming of native grasslands by invasive grasses
2021
- Traits along the leaf economics spectrum structure communities and traits of foliar endophytic symbionts
2021
- Transcriptional profiles of a foliar fungal endophyte (Pestalotiopsis, Ascomycota) and its endohyphal bacterium (Luteibacter, Gammaproteobacteria) in co-culture support sulfur exchange and growth regulation.
2021
- Ecological generalism drives hyperdiversity of secondary metabolite gene clusters in xylarialean endophytes
2021
- Drivers and implications of distance decay differ for ectomycorrhizal and foliar endophytic fungi across an anciently fragmented landscape.
2021
- Climate drives endophyte diversity and hotspots at a trans-biome scale
2021
- Fire history and local factors shape ectomycorrhizal communities associated with Pinus ponderosa in mountains of the Madrean Sky Island Archipelago
2021
- Closely related tree species support distinctive communities of seed-associated fungi in a lowland tropical forest.
2021
- Coniochaeta elegans sp. nov., C. montana sp. nov., and C. nivea sp. nov.: three new species of endophytes with distinctive morphology and functional traits.
2021
- Clohesyomyces symbioticus sp. nov., a fungal endophyte associated with roots of water smartweed (Persicaria amphibia)
2021
- Strobiloscyphones A-F, 6-isopentylsphaeropsidones and other metabolites from Strobiloscypha sp. AZ0266, a leaf-associated fungus of Douglas fir
2021
- Comparative transcriptomics of fungal endophytes in co-culture with their hosts reveals fungal trophic lability and neutral to slightly positive effects on moss growth rates
2021
- Methodological approaches frame insights into endophyte richness and community composition
2021
- Community dynamics of soil-borne fungal communities along elevation gradients in neotropical and paleotropical forests
2021
- Endophytism in Pezizomycetes: the exception or the rule?
2021
- Two new endophytic species enrich the Coniochaeta endophytica / C. prunicola clade: Coniochaeta palaoa sp. nov. and C. lutea sp. nov.
2021
- Climate and seasonality drive the richness and composition of tropical fungal endophytes at a landscape scale
2021
- An epigenetic modifier induces production of 3-(4-oxopyrano)-chromen-2-ones in sp. AST0006, an endophytic fungus of
2020
- Extending plant defense theory to seeds
2020
- Teratopyrones A-C, Dimeric Naphtho-γ-Pyrones and Other Metabolites from sp. AK1128, a Fungal Endophyte of
2020
- A complete genome sequence for Luteibacter pinisoli MAH-14
2019
- Host availability drives distributions of fungal endophytes in the imperiled boreal realm
2019
- Diversity and composition of cultivable microbial communities in nectar of moth-pollinated plants in the Sonoran Desert
2019
- T-BAS Version 2.1: Tree-Based Alignment Selector toolkit for evolutionary placement of DNA sequences and viewing alignments and specimen metadata on curated and custom trees
2019
- Resolving metaorganism identities through a holistic framework combining reductionist and integrative approaches.
2019
- Coniochaeta endophytica sp. nov., a foliar endophyte that showcases challenges in defining species boundaries, even with multiple lines of evidence
2019
- T-BAS version 2.1: Tree-based alignment selector toolkit for evolutionary placement and viewing of alignments and metadata on curated and custom reference trees
2019
- Age-related variation in the oral microbiome of urban Cooper’s hawks (Accipiter cooperii)
2019
- Demography of a declining, endangered cactus in the Sonoran Desert
2019
- Diversity and distribution of microbial communities in floral nectar of two night-blooming plants of the Sonoran Desert
2019
- Observation on the early establishment of foliar endophytic fungi in leaf discs and living leaves of a model woody angiosperm, Populus trichocarpa (Salicaceae)
2018
- Quantifying beetle-macrofungal associations in a temperate biodiversity hotspot
2018
- Context-dependent and variable effects of endohyphal bacteria on interactions between fungi and seeds
2018
- Synchronized radiations in plants and fungi linked to symbiosis
2018
- Using collections data to infer biogeographic, environmental, and host structure in communities of endophytic fungi
2018
- Cytotoxic and non-cytotoxic metabolites from Teratosphaeria sp. FL2137, a fungus associated with Pinus clausa
2018
- Metatranscriptomic analysis of active fungal communities across a senescence gradient of the moss Dicranum scoparium
2018
- A novel proof of concept for capturing the diversity of endophytic fungi preserved in herbarium specimens
2018
- Interaction networks of macrofungi and mycophagous beetles reflect diurnal variation and the size and spatial arrangement of resources
2018
- Distributions of ectomycorrhizal and foliar endophytic fungal communities associated with Pinus ponderosa along a spatially constrained elevation gradient
2018
- Cytotoxic and Other Metabolites from Teratosphaeria sp. FL2137, a fungus associated with foliage of Pinus clausa
2018
- Dormancy-defense syndromes and trade-offs between physical and chemical defenses in seeds
2018
- Absence of genome reduction in diverse, facultative endohyphal bacteria
2017
- Bifiguratus adelaidae, gen. nov. sp. nov., a new lineage of Mucoromycotina with endophytic and soil-dwelling strains
2017
- Soilborne fungi have host affinity and host-specific effects on seed germination and survival in a lowland tropical forest
2017
- Chlorinated dehydrocurvularins and alterperylenepoxide A from Alternaria sp. AST0039, a fungal endophyte of Astragalus lentiginosus
2017
- Montagnuphilones A-G, azaphilones from Montagnulaceae sp. DM0194, a fungal endophyte of submerged roots of Persicaria amphibia
2017
- An epigenetic modifier induces production of (10S)-verruculide B, an inhibitor of protein tyrosine phosphatases by Phoma sp. nov. LG219, a fungal endophyte of Parkinsonia microphylla
2017
- An endohyphal bacterium (Chitinophaga, Bacteroidetes) influences carbon source use by Fusarium keratoplasticum (F. solani species complex, Nectriaceae)
2017
- Bacterial endosymbionts: master modulators of fungal phenotypes
2017
- Using cytochrome b to identify nests and museum specimens of cryptic songbirds
2017
- Community structure of fern-affiliated endophytes in three neotropical forests
2017
- Ophidiomyces ophiodiicola on a captive black racer (Coluber constrictor) and a garter snake (Thamnophis sirtalis) in Pennsylvania
2016
- Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of the Xylariaceae.
2016
- Oxaspirol B with p97 inhibitory activity and other oxaspirols from Lecythophora sp. FL1375 and FL1031, endolichenic fungal strains inhabiting Parmotrema tinctorum and Cladonia evansii
2016
- Interaction type influences ecological network structure more than local abiotic conditions: evidence from fungal symbionts at a continental scale
2016
- Isolation of endohyphal bacteria from foliar fungi and in vitro establishment of their symbiotic associations
2016
- Chemical constituents and their antibacterial activity from the tropical endophytic fungus Diaporthe sp. F2934
2016
- Enhancing fungal species discovery and description using T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads, and metadata visualization
2016
- Pervasive effects of wildfire on foliar endophyte communities in montane forest trees
2016
- Diversity, Specificity, and Phylogenetic Relationships of Endohyphal Bacteria in Fungi that Inhabit Tropical Seeds and Leaves
2016
- Variation in ectomycorrhizal communities associated with Oreomunnea mexicana (Juglandaceae) in tropical montane forests
2015
- Cytotoxic cytochalasins and other metabolites from Xylariaceae sp. FL0390, a fungal endophyte of Spanish moss
2015
- Do microbes and abrasion by soil particles influence seed persistence and loss of physical dormancy in tropical seedbanks?
2015
- Metatranscriptome analysis of fig flowers suggests mechanisms for mutualism stability and gall induction
2015
- Fungal endophytes of desert plants: infrequent in culture, but diverse and distinctive symbionts
2015
- Anteaglonialides A–F, Spironaphtho-1,8-dioxincyclohexa--butyrolactones and Palmarumycins CE1–CE3 from Anteaglonium sp. FL0768, a fungal endophyte of sand spikemoss, Selaginella arenicola
2015
- Pulvinulin A, Graminin C, and cis-Gregatin B - New Natural Furanones from Pulvinula sp 11120, a Fungal Endophyte of Cupressus arizonica
2015
- Sesquiterpenes and other constituents of Xylaria sp NC1214, a fungal endophyte of the moss Hypnum sp.
2015
- Phylogenetic analyses of eurotiomycetous endophytes reveal their close affinities to Chaetothyriales, Eurotiales, and a new order – Phaeomoniellales
2015
- Tissue storage and primer selection influence pyrosequencing-based inferences of diversity and community composition of endolichenic and endophytic fungi
2014
- Communities of fungal endophytes in tropical forest grasses: highly diverse host- and habitat generalists characterized by strong spatial structure
2014
- Fungal endophytes of aquatic macrophytes: diverse host-generalists characterized by tissue preferences and geographic structure
2014
- Multigene phylogenetic analysis for 1307 fungi representing 1139 infrageneric taxa, 312 genera, and 66 families of the class Lecanoromycetes (Ascomycota)
2014
- A distributed effort to improve annotation of ITS sequences from plant pathogenic fungi
2014
- Delitschiapyrone A, a pyrone-naphthalenone adduct bearing an unprecedented pentacyclic ring system from the leaf-associated fungus Delitschia sp. FL1581
2014
- Chemical and bioactive natural products from Microthyriaceae sp., an endophytic fungus from a tropical grass.
2014
- Sloth fur as a novel source of fungi with potent anti-parasitic and anti-bacterial activity.
2014
- Interannual variation and host affiliations of endophytic fungi associated with ferns at La Selva, Costa Rica.
2014
- Genetic variation in horizontally transmitted symbionts of pine needles reveals population structure in cryptic species
2014
- 10;-Deoxy-10 alpha-hydroxyascochlorin, a new cell migration inhibitor and other metabolites from Acremonium sp., a fungal endophyte in Ephedra trifurca
2013
- Novel aspects in the life cycle and biotrophic interactions in the Pezizomycetes
2013
- Factors influencing communities of foliar fungal endophytes in riparian woody plants
2013
- Secoemestrin D, a cytotoxic epitetrathiodioxopiperizine, and Emericellenes A-E, five sesterterpenoids from Emericella sp AST0036, a fungal endophyte of Astragalus lentiginosus.
2013
- Bioactivity of fungal endophytes as a function of their taxonomy and the taxonomy and distribution of host plants.
2013
- Fungal endophytes in riparian areas of Arizona illustrate effects of microenvironment on symbiont assemblages
2013
- Novel aspects in the life cycle and biotrophic interactions in Pezizomycetes (Ascomycota, Fungi)
2013
- Relative investment in egg load and poison sac in fig wasps: Implications for physiological mechanisms underlying seed and wasp production in figs
2013
- Mycoleptodiscins A and B, cytotoxic alkaloids from the endophytic fungus Mycoleptodiscus sp. F0194
2013
- Antiparasitic and anticancer constituents of the endophytic fungus Aspergillus sp. strain F1544
2012
- Student-directed discovery of the plant microbiome and its products
2012
- Host and geographic structure of endophytic and endolichenic fungi at a continental scale
2012
- Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes
2012
- Origin of pisatin demethylase (PDA) in the genus Fusarium
2012
- Persistent effects of wildfire on fungal endophyte communities in Quercus hypoleucoides and Juniperus deppeana
2012
- IAA production by endophytic Pestalotiopsis is enhanced by an endohyphal bacterium
2012
- Culture-free survey reveals diverse fungal communities associated with figs (Ficus spp.) in Panama
2012
- Coibanoles, a new class of meroterpenoids produced by Pycnoporus sanguineus
2012
- Antifungal depsidone metabolites from Cordyceps dipterigena, an endophytic fungus antagonistic to the phytopathogen Gibberella fujikuroi
2012
- Geopyxins A-E, ent-kaurane diterpenoids from endolichenic fungal strains, Geopyxis aff. majalis and Geopyxis sp. AZ0066: structure-activity relationships of geopyxins and their analogues
2012
- Chemical constituents of the new endophytic fungus Mycosphaerella sp. nov. and their anti-parasitic activity
2011
- Seed survival in soil: Interacting effects of predation, dormancy and the soil microbial community
2011
- Interkingdom gene transfer of a hybrid NPS/PKS from bacteria to filamentous ascomycota
2011
- Screening and evaluation of antiparasitic and in vitro anticancer activities of Panamanian endophytic fungi
2011
- Smardaesidins A-G, new isopimarane and 20-Nor-isopimarane diterpenoids isolated from Smardaea sp., endophyte of the moss Ceratodon purpureus
2011
- Culturing and direct PCR suggest prevalent host generalism among diverse fungal endophytes of tropical forest grasses
2011
- Diversity, abundance and community network structure in sporocarp-associated beetle communities of the central Appalachian Mountains
2010
- Moving from pattern to process in fungal symbioses: Linking functional traits, community ecology and phylogenetics
2010
- Fungal endophyte diversity in coffee plants from Colombia, Hawai'i, Mexico and Puerto Rico
2010
- Community Analysis Reveals Close Affinities Between Endophytic and Endolichenic Fungi in Mosses and Lichens
2010
- Diverse bacteria inhabit living hyphae of phylogenetically diverse fungal endophytes
2010
- Not every fungus is everywhere: Scaling to the biogeography of fungal-plant interactions across roots, shoots and ecosystems
2010
- Protocol to isolate sponge-associated fungi from tropical waters and an examination of their cardioprotective potential
2010
- Interwoven branches of the plant and fungal trees of life
2010
- A phylogenetic estimation of trophic transition networks for ascomycetous Fungi: Are lichens cradles of symbiotrophic Fungal diversification?
2009
- Fungal endophytes: Diversity and functional roles: Tansley review
2009
- Diversity and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree: a case study for analysing fungal environmental samples
2009
- FESIN workshops at ESA - The mycelial network grows
2009
- A review of the Bembidion (Odontium) aenulum subgroup (Coleoptera: Carabidae), with description of a new species
2009
- Geographic locality and host identity shape fungal endophyte communities in cupressaceous trees
2008
- Activity against Plasmodium falciparum of lactones isolated from the endophytic fungus Xylaria sp.
2008
- Moths that vector a plant pathogen also transport endophytic fungi and mycoparasitic antagonists
2008
- Host generalists dominate fungal communities associated with seeds of four neotropical pioneer species
2008
- Endophytic fungi as biocontrol agents of Theobroma cacao pathogens
2008
- Endomelanconiopsis, a new anamorph genus in the Botryosphaeriaceae
2008
- Fungal networks made of humans: UNITE, FESIN, and frontiers in fungal ecology
2008
- Preserving accuracy in GenBank
2008
- Fungal endophytes nearly double minimum leaf conductance in seedlings of a neotropical tree species
2007
- The authors reply [2]
2007
- The influence of seed source, Habitat and fungi on cecropia seed survival in two neotropical forests
2007
- Diversity and host range of foliar fungal endophytes: Are tropical leaves biodiversity hotspots?
2007
- Phylogenetic relationships, host affinity, and geographic structure of boreal and arctic endophytes from three major plant lineages
2007
- Diversity, host affinity, and distribution of seed-infecting fungi: A case study with Cecropia
2007
- Diversity and phylogenetic affinities of foliar fungal endophytes in loblolly pine inferred by culturing and environmental PCR
2007
- Filling key gaps in population and community ecology
2007
- Biotic and abiotic factors influencing the distribution of the Huachuca springsnail (Pyrgulopsis thompsoni)
2007
- Understanding the diversity of foliar endophytic fungi: progress, challenges, and frontiers
2007
- A five-gene phylogeny of Pezizomycotina
2006
- Reconstructing the early evolution of Fungi using a six-gene phylogeny
2006
- New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes
2006
- Assembling the fungal tree of life: Progress, classification, and evolution of subcellular traits
2004
- Fungal endophytes limit pathogen damage in a tropical tree
2003
- Canopy cover and leaf age affect colonization by tropical fungal endophytes: Ecological pattern and process in Theobroma cacao (Malvaceae)
2003
- Herbivory in a fragmented tropical forest: Patterns from islands at Lago Gatún, Panama
2002
- Fungal endophytes in dicotyledonous neotropical trees: Patterns of abundance and diversity
2001
- Are tropical fungal endophytes hyperdiverse?
2000
- The fruits the agouti ate: Hymenaea courbaril seed fate when its disperser is absent
1999