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Courses
- MCBGMethods in Cell Biology and Genomics
- PBMEPlant Biochemistry and Metabolic Engineering
Grants
- Bench fees for Nadeem Munawar
Principal Investigator (PI)
2019
$3.5K
- Bench fees for Adnan Iqbal
Principal Investigator (PI)
2018
$3.5K
- Bench fees for Beenish Afzal
Principal Investigator (PI)
2018
$3.5K
- Bench fees for Samina Bashir
Principal Investigator (PI)
2018
$3.5K
- Higher Education Commission Pakistan Scholarship
Principal Investigator (PI)
2016
$2.8K
- RAPID: Development of a Handheld, Rapid Molecular Diagnostic Tool for Ebola
Principal Investigator (PI)
2015
$211.2K
- Identification of Changes in Gene Expression at the Earliest Stages of Prostate Oncogenesis
Principal Investigator (PI)
2014
$100.0K
- Characterization and manipulation of primary components potentially involved in ABA-mediated repression of grape bud dormancy release and in its...
Principal Investigator (PI)
2013
$105.0K
- Cell-specific analysis of transcription and epigenomic status in PDAC
Principal Investigator (PI)
2012
$350.6K
- miRNA HD Array Platform (SBIR Project)
Principal Investigator (PI)
2009
$220.1K
News
- New Look Inside Cell Nucleus Could Improve Cancer Diagnostics
2013
- 24 Hours and More Than 30,000 Meals
2010
- Student Union Introduces New Restaurant, Revamps U-Mart
2009
- Research May Help Plants, Humans Survive Stress, Disease
2009
- UA Scientist Studied Nobel Prize-Winning Idea
2008
- Highland Market Now Open 24/7
2008
- Starbucks Opens in the Union
2008
- Plant Scientists Develop New Cell-Sorting Technique
2008
- New Health-Conscious Restaurant Opens in Union
2007
- Redington Restaurant Now Offers Breakfast
2006
- Cafe Sonora Boasts New, Improved Menu
2005
- IQ Fresh Restaurant Now Open in Student Union
2004
- Highland Market Set to Open
2004
- Scientists Map What Makes a Root a Root
2003
- Unlocking the Genetic Codes of Maize and Rice
2003
- Working Together: Biomedical Science and Biotechnology Institute to Promote Interdisciplinary Research
2002
- Year in Review 2002: Incredible Science
2002
- Seven UA Scientists Elected AAAS Fellows for 2002
2002
Publications (194)
- Validation of crowd‐sourced plant genome size measurements
2022
- Fluorescence activated cell sorting—A selective tool for plant cell isolation and analysis
2022
- Application-based guidelines for best practices in plant flow cytometry
2021
- Fluorescence activated cell sorting-A selective tool for plant cell isolation and analysis
2021
- Shapiro's Laws Revisited: Conventional and Unconventional Cytometry at CYTO2020
2021
- Best practices in the flow cytometry of microalgae
2021
- Maize single-nucleus transcriptomes comprehensively describe signaling networks governing movement and development of grass stomata.
2021
- Flow Cytometry and Sorting in Arabidopsis.
2021
- Best practices in plant cytometry
2021
- The chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates.
2021
- From mouse to mouse-ear cress: nanomaterials as delivery carriers in plant biotechnology.
2021
- The use of flow cytometry for estimating genome sizes and DNA ploidy levels in plants.
2021
- Validation of crowd-sourced plant genome size measurements
2021
- Identification of potential post-ethylene events in the signaling cascade induced by stimuli of bud dormancy release in grapevine
2020
- Identification of post-ethylene events in the signaling cascade induced by dormancy release stimuli.
2020
- Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)
2020
- Structure-based prediction of protein–protein interactions between GhWlim5 Domain1 and GhACTIN-1 proteins: a practical evidence with improved fibre strength
2020
- Chemical control of rodents and its impact on rodent infestations during subsequent cropping season
2020
- Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)
2019
- BZU2/ZmMUTE controls symmetrical division of guard mother cell and specifies neighbor cell fate in maize
2019
- Optimizing Periplasmic Expression in Escherichia coli for the Production of Recombinant Proteins Tagged with the Small Metal-Binding Protein SmbP
2019
- A spatiotemporal DNA endoploidy map of the Arabidopsis root reveals roles for the endocycle in root development and stress adaptation.
2018
- Distinct gibberellin functions during and after grapevine bud dormancy release
2018
- A Spatiotemporal DNA Endoploidy Map of the Arabidopsis Root Reveals Roles for the Endocycle in Root Development and Stress Adaptation
2018
- Transient induction of a subset of ethylene biosynthesis genes is potentially involved in regulation of grapevine bud dormancy release.
2018
- Distinct functions for gibberellin during and after grape bud dormancy release
2018
- Nuclear Cytometry: Analysis of the Patterns of DNA Synthesis and Transcription Using Flow Cytometry, Confocal Microscopy, and RNA Sequencing
2018
- ABA catabolism enhances dormancy release of grapevine buds.
2018
- Abscisic acid catabolism enhances dormancy release of grapevine buds
2018
- Mie scatter and interfacial tension based real-time quantification of colloidal emulsion nucleic acid amplification
2017
- Guidelines for the use of flow cytometry and cell sorting in immunological studies
2017
- Flow cytometry and single nucleus sorting for Cre-based analysis of changes in transcriptional states
2016
- Molecular mechanism of action for the novel biostimulant CYT31 in plants exposed to drought stress.
2016
- Expression and purification of recombinant proteins in Escherichia coli tagged with the metal-binding protein CusF
2016
- Redrawing the frontiers in the age of post-publication review
2015
- Digital data acquisition and processing
2015
- TOPOISOMERASE 6B is involved in chromatin remodelling associated with control of carbon partitioning into secondary metabolites and cell walls, and epidermal morphogenesis in Arabidopsis
2014
- Endoreduplicative standards for calibration of flow cytometric C-Value measurements
2014
- Challenges and Solutions in Cytometric Measurements of Non-Mammalian Species
2014
- Flow cytometry and sorting in Arabidopsis
2014
- Genome size in the Fagaceae and its general implications for trees.
2014
- RNA-Seq from single nuclei
2013
- RNA-sequencing from single nuclei
2013
- Identification and characterization of a repertoire of genes differentially expressed in developing top ear shoots between a superior hybrid and its parental inbreds in Zea mays L.
2013
- The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads
2012
- Flow Cytometry and Cell Sorting: the Next Generation: Introduction
2012
- RNA interference-mediated gene knockdown within specific cell types
2012
- Enhanced salt stress tolerance of rice plants expressing a vacuolar H sup + /sup -ATPase subunit c1 (SaVHAc1) gene from the halophyte grass Spartina alterniflora Löisel
2012
- Enhanced salt stress tolerance of rice plants expressing a vacuolar H+-ATPase subunit c1 (SaVHAc1) gene from the halophyte grass Spartina alterniflora
2012
- Flow cytometry and fluorescence-activated cell sorting in plants: the past, present, and future
2012
- High-throughput monitoring of plant nuclear DNA contents via flow cytometry
2012
- Flow Cytometry and Cell Sorting: the Next Generation
2012
- A high-density quantitative nuclease protection microarray platform for high throughput analysis of gene expression
2011
- The grand challenges in enabling data-intensive biological research
2011
- Multiparametric analysis, sorting, and transcriptional profiling of plant protoplasts and nuclei according to cell type
2011
- Optimizing microarray-based in situ transcription-translation of proteins for matrix-assisted laser desorption ionization mass spectrometry
2011
- Dissecting quantitative resistance against blast using heterogeneous inbred families in rice
2011
- Barcodes for DNA sequencing with guaranteed error correction capability
2011
- The genomes of all angiosperms: a call for a coordinated global census
2011
- Dissecting quantitative resistance against blast disease using heterogeneous inbred family lines in rice
2011
- Analysis and synthesis of boolean cell-cycle gene regulatory networks
2011
- Optimizing microarray-based in situ transcription-translation of proteins for MALDI mass spectrometry
2011
- Frontiers in genomic assay technologies: The grand challenges in enabling data-intensive biological research
2011
- Functional analysis of the gossypium arboreum genome
2010
- Applications of microarrays for crop improvement: Here, there, and everywhere
2010
- Genome structures and halophyte-specific gene expression of the extremophile thellungiella parvula in comparison with Thellungiella salsuginea (Thellungiella halophila) and arabidopsis
2010
- Development of high-yield autofluorescent protein microarrays using hybrid cell-free expression with combined Escherichia coli S30 and wheat germ extracts
2010
- Transcript profiling in Vitis riparia during chilling requirement fulfillment reveals coordination of gene expression patterns with optimized bud break
2009
- Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis
2009
- Gene-expression profiling of grape bud response to two alternative dormancy-release stimuli expose possible links between impaired mitochondrial activity, hypoxia, ethylene-ABA interplay and cell enlargement
2009
- Measuring genome size of desert plants using dry seeds
2009
- Nucleomics: Targeting and Genetic Analysis of Nutrient-Sensing Cells
2009
- Analysis of Photoperiod Sensitivity5 sheds light on the role of phytochromes in photoperiodic flowering in rice
2009
- Simultaneous flow cytometric quantification of plant nuclear DNA contents over the full range of described angiosperm 2C values
2009
- Evidence for antisense transcription associated with microRNA target mRNAs in arabidopsis
2009
- RiceArrayNet: A database for correlating gene expression from transcriptome profiling, and its application to the analysis of coexpressed genes in rice
2009
- Plant systems biology comes of age
2008
- Targeted protein accumulation promoted by autoassembly and its recovery from plant cells
2008
- Development and evaluation of a high-throughput, low-cost genotyping platform based on oligonucleotide microarrays in rice
2008
- Global characterization of cell-specific gene expression through fluorescence-activated sorting of nuclei
2008
- Isolation of candidate genes for tolerance of abiotic stresses.
2008
- Diurnal and circadian rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors
2008
- Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity
2007
- Digital expression profiling of a grape-bud EST collection leads to new insight into molecular events during grape-bud dormancy release
2007
- Protoplast Analysis using Flow Cytometry and Sorting
2007
- Analysis of Plant Gene Expression Using Flow Cytometry and Sorting
2007
- Nucleomics of glucose sensing cells: methodology for cell-type specific analysis of gene expression
2007
- High-throughput, high-sensitivity analysis of gene expression in arabidopsis
2007
- Comparison of the contributions of the nuclear and cytoplasmic compartments to global gene expression in human cells
2007
- Nanobiotechnology: Silica breaks through in plants
2007
- Involvement of calcium signalling in dormancy release of grape buds
2007
- No DNA loss in autotetraploids of Arabidopsis thaliana
2006
- The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza
2006
- DNA microarray analyses in higher plants
2006
- A framework of integrating gene relations from heterogeneous data sources: an experiment on Arabidopsis thaliana
2006
- Development of a comprehensive detection method for medicinal and toxic plant species.
2006
- Global studies of cell type-specific gene expression in plants
2006
- Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon.
2006
- AtSAP18, an orthologue of human SAP18, is involved in the regulation of salt stress and mediates transcriptional repression in Arabidopsis
2006
- The daunting process of MIAME [2]
2006
- Cell type-specific characterization of nuclear DNA contents within complex tissues and organs
2005
- Metabolic engineering of dhurrin in transgenic Arabidopsis plants with marginal inadvertent effects on the metabolome and transcriptome
2005
- Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expression
2005
- SYMBIODINIUM (PYRRHOPHYTA) GENOME SIZES (DNA CONTENT) ARE SMALLEST AMONG DINOFLAGELLATES
2005
- Cell type-specific expression profiting in plants via cell sorting of protoplasts from fluorescent reporter lines
2005
- Design, production, and utilization of long oligonucleotide microarrays for expression analysis in maize
2005
- Nuclear DNA content of the whitefly Bemisia tabaci (Aleyrodidae: Hemiptera) estimated by flow cytometry
2005
- Performance analysis of a dual-buffer architecture for digital flow cytometry
2005
- Methods for transcriptional profiling in plants. Be fruitful and replicate
2004
- Transcript expression profiles of Arabidopsis thaliana grown under controlled conditions and open-air elevated concentrations of CO sub 2 /sub and of O sub 3 /sub
2004
- Integrative flow cytometric and microarray approaches for use in transcriptional profiling.
2004
- A probable Na sup + /sup (K sup + /sup )/H sup + /sup exchanger on the chloroplast envelope functions in pH homeostasis and chloroplast development in Arabidopsis thaliana
2004
- Salt cress. A halophyte and cryophyte arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles
2004
- A probable Na+(K+)/H+ exchanger on the chloroplast envelope functions in pH homeostasis and chloroplast development in Arabidopsis thaliana
2004
- Cytometry and plant sciences: a personal retrospective
2004
- Nuclear dynamics in higher plants
2004
- The rainbow of fluorescent proteins
2004
- The construction and use of bacterial DNA microarrays based on an optimized two-stage PCR strategy.
2003
- The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress
2003
- Temporal progression of gene expression responses to salt shock in maize roots
2003
- A gene expression map of the Arabidopsis root
2003
- Global analysis of cell type-specific gene expression
2003
- Factors affecting nuclear dynamics and green fluorescent protein targeting to the nucleus in Arabidopsis thaliana roots
2002
- Improved data acquisition system for digital flow cytometry
2002
- Monitoring large-scale changes in transcript abundance in drought- and salt-stressed barley
2002
- Comparison of RNA expression profiles based on maize expressed sequence tag frequency analysis and micro-array hybridization
2002
- GENOMICS-BASED UNDERSTANDING OF ABIOTIC STRESS RESPONSES IN PLANTS :
2001
- Microarray-based analysis of gene expression in very large gene families: the cytochrome P450 gene superfamily of Arabidopsis thaliana
2001
- Gene expression profiling of salinity stress responses using expressed sequence tag (EST)-based microarrays in the common ice plant, Mesembryanthemum crystallinum
2001
- Modulation of Abscisic Acid Signal Transduction and Biosynthesis by an Sm-like Protein in Arabidopsis
2001
- Microarray-based survey of repetitive genomic sequences in Vicia spp.
2001
- CYP83B1, a cytochrome P450 at the metabolic branch paint in auxin and indole glucosinolate biosynthesis in Arabidopsis
2001
- Gene expression profiles during the initial phase of salt stress in rice
2001
- A genomics approach towards salt stress tolerance
2001
- Hydrogen peroxide is involved in abscisic acid-induced stomatal closure in Vicia faba
2001
- High-density microarrays for gene expression analysis
2001
- Analysis of nuclear DNA content and ploidy in higher plants.
2001
- Printing DNA microarrays using the Biomek 2000 laboratory automation workstation.
2001
- Nuclear dynamics in Arabidopsis thaliana
2000
- Implementing microarrays for the study of plant genomics
1999
- Flow cytometric analysis and FACS sorting of cells based on GFP accumulation
1999
- Insect-induced synthesis of phytoecdysteroids in spinach, Spinacia oleracea
1999
- Reference standards for determination of DNA content of plant nuclei
1999
- Green fluorescent protein targeted to the nucleus, a transgenic phenotype useful for studies in plant biology
1999
- Flow cytometric analysis of transgene expression in higher plants: Green fluorescent protein
1999
- Adapting the Biomek® 2000 Laboratory Automation Workstation for printing DNA microarrays
1998
- Isolation and characterization of an Arabidopsis thaliana C-8,7 sterol isomerase: Functional and structural similarities to mammalian C-8,7 sterol isomerase/emopamil-binding protein
1998
- Nuclear expressed sequence Tag (NEST) analysis: a novel means to study transcription through amplification of nuclear RNA
1998
- Damage-induced accumulation of phytoecdysteroids in spinach: A rapid root response involving the octadecanoic acid pathway
1998
- Systematic reverse genetics of transfer-DNA-tagged lines of Arabidopsis - Isolation of mutations in the cytochrome P450 gene superfamily
1998
- Characterization of the targeted nuclear accumulation of GFP within the cells of transgenic plants
1997
- Green-fluorescent protein fusions for efficient characterization of nuclear targeting
1997
- Studies on the mode of action of cholesterol oxidase on insect midgut membranes
1997
- Characterization of Zea mays endosperm C-24 sterol methyltransferase: One of two types of sterol methyltransferase in higher plants
1997
- Systematic reverse genetics of the P450 gene family in arabidopsis thaliana
1997
- Automated particle classification based on digital acquisition and analysis of flow cytometric pulse waveforms
1996
- Ecdysone 20-monooxygenase, a cytochrome P450 enzyme from spinach, Spinacia oleracea
1996
- Z-membranes: Artificial organelles for overexpressing recombinant integral membrane proteins
1996
- Preface
1995
- Neural network analysis of digital flow cytometric data
1995
- Green-fluorescent protein as a new vital marker in plant cells
1995
- Flow cytometric analysis using digital signal processing
1995
- GREEN-FLUORESCENT PROTEIN AS A NEW VITAL MARKER IN PLANT-CELLS
1995
- Chapter 1 Flow Cytometric Analysis of Transgene Expression in Higher Plants: Green-Fluorescent Protein
1995
- The callus associated protein (CAP) gene of Nicotiana tabacum: Isolation, characterization, and evidence for possible function as a transcriptional factor
1994
- Chapter 31 Flow Cytometry and Sorting of Plant Protoplasts and Cells
1994
- Nuclear DNA content of monocotyledons and related taxa
1994
- Flow cytometry and sorting of plant protoplasts and cells
1994
- Biosynthesis, processing and targeting of the G-protein of vesicular stomatitis virus in tobacco protoplasts
1992
- SYSTEMIC ENDOPOLYPLOIDY IN ARABIDOPSIS-THALIANA
1991
- Systemic endopolyploidy in Arabidopsis thaliana
1991
- Flow cytometric analysis of plant genomes
1990
- Expression of photosynthesis-related gene fusions is restricted by cell type in transgenic plants and in transfected protoplasts
1990
- Systemic endopolyploidy in Arabidopsis thaliana.
1990
- Developmentally regulated systemic endopolyploidy in succulents with small genomes
1990
- Isolation and flow cytometric characterization of plant protoplasts
1990
- Chapter 48 Flow Cytometric Analysis of Plant Genomes
1990
- Chapter 47 Isolation and Flow Cytometric Characterization of Plant Protoplasts
1990
- Analysis of Higher Plants by Flow Cytometry and Cell Sorting
1989
- Flow cytometric characterization of the chlorophyll contents and size distributions of plant protoplasts.
1988
- Isolation and characterization of monoclonal antibodies directed against plant plasma membrane and cell wall epitopes: Identification of a monoclonal antibody that recognizes extensin and analysis of the process of epitope biosynthesis in plant tissues and cell cultures
1988
- Storage protein accumulation patterns in somatic embryos of cotton (Gossypium hirsutum L.)
1987
- Factors governing the flow cytometric analysis and sorting of large biological particles
1987
- Characterization of somatic embryogenesis and plant regeneration in cotton (Gossypium hirsutum L.)
1986
- Selection of Somatic Hybrid Plants in Nicotiana Through Fluorescence-Activated Sorting of Protoplasts
1985
- Flow sorting and culture of protoplasts: Conditions for high-frequency recovery, growth and morphogenesis from sorted protoplasts of suspension cultures of nicotiana
1984
- Presence of a plant cell wall is not required for transformation of Nicotiana by Agrobacterium tumefaciens
1984
- Flow sorting and culture of plant protoplasts
1984
- Rapid flow cytometric analysis of the cell cycle in intact plant tissues
1983
- Improvement of Anther Culture in Nicotiana: Media, Cultural Conditions and Flow Cytometric Determination of Ploidy Levels
1983
- The effects of inhibitors of cell wall synthesis on tobacco protoplast development
1982
- Microfluorimetric quantitation of cellulose biosynthesis by plant protoplasts using Calcofluor White
1981
- Analysis of the initial stages of plant protoplast development using 33258 Hoechst: reactivation of the cell cycle
1981
- The isolation of plasma membrane from protoplasts of soybean suspension cultures
1977